CDS

Accession Number TCMCG042C78523
gbkey CDS
Protein Id XP_016510659.1
Location complement(join(1189..1320,1516..1627,1860..1942,2031..2324,3479..3742,3824..4267,5624..6220))
Gene LOC107827938
GeneID 107827938
Organism Nicotiana tabacum

Protein

Length 641aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016655173.1
Definition PREDICTED: KH domain-containing protein At4g18375-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category A
Description K homology RNA-binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K21444        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009911        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045596        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048497        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048582        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090700        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCACGAACCCAACCTCGTCGCCGCCTCCTCCGTCCCCCACTCCGCCACCACCGTACCCGCCGCCGCCAACAACAACTCACCGCTACCGAGGCGTGTCGTGTTCCGTCTCCTCTGCCATGCTTCCCGCGTCGGAGGAGTCATCGGAAAATCAGGTTCCATCATCCGACAACTCCAACAAGATACCTCCGCAAAGATTCACGTTGATGTCTCCACTCCCAACTCCGACCACCACCGCCTCATCGTCGTCGTAGCCTCCGCTTCCCTAAACAAGAAGATTAGGCTCAATCTCTTGGGCCCCACCGGGGGGGATGAGCAGCAGTGGAATGATGAGATTGAGGTTTCGGCTGCACAAGAGGCACTCGTTAGGGTTTTCGAAAGAGTGATAGATGTAACAGCTGAAAATAATGGCGTTGTTTTGGGTGCGGAGAGTGTGGTGTCGTGTAGGTTATTAGTGAAGGGGAATCAGGTGGGTGCTTTGATGGGTAAAGGTGGAAAAGTAATTGATGCAATTAGAAGAGAGAATGGATGTAGGATTAAGGTTTTAACTTCAGATAAGTTGCCATCTTGTGCTTCGCCCAATGATGAAATAGTTGAGATAGAAGGGGACATTCTGGCTGTTAAGAAAGCACTTGTTGCTGTCAGTCGCCGACTTCAAGATTGTTTCTCTGTTGAAAGAAATAGAACGGTTGAGAATGCGCCACTTGAGTTAGATTCGGAACAGACTTTGCCTCCTCGGCAAGTTGATCTACCTGCACAAAGGAGTTCAATGTCACAGCCCATAACCACAAGCTCTTTCTCAGGTGCCTCTGGATGCCATCCTGTGTCTCTAGATGCTGAGAAGTTTTCCAACATTGATGCAAAAATACCATTACAAGAGGTTGCTTTCAGGATTCTCTGCCCAAATGAAAAGGTTGGTGCAATAATAGGCAAGGGTGGGGCAATTGTAAGGACTCTTCAGAATGACAGCGGTGCAAGCATCGCTGTTGGGCCAAATGTCGTTGAGTGCAACGAGCGAGTGATAGCTATTACCGCATTAGAGAACCTAGAATTACGGAAATCTCCAGCACAAACCGCTGCGGTTCTTGTTTTTGATCGGATTCTGGACGCTGGCTCTGGGATGAATTTGGGTACAAGATCACTAATTACATTTCGACTTGTGGTGCCATCCAACCAAGTTGGTTGTTTATTGGGGAAGGGAGGCGCAATAATTTCAGAGATAAGGAAGGAGACAGGTTCCAGCATACGAATATTTAGAGGTGACCAAGTCCCTAAGTGTGTCTCAGACAATGATGAAGTTGTGCAGATTGCAGGTGAGTTTGTAAATGTACAAGATGCTTTACGAAATGTCACTGGTCGGTTGCGTGATAACCTCTTGGCAGCGAAGGTGTCAAATGGTGCTGTAAGCAGAAACAGCTCTCCTCTGGCGTCTGAAAGTAGTTTCTCTGGCCAAATGAAGGAACCTCCTTTTGGATTTCATCGGTCTAGTGGTGTCTCACATGGTATCAATCAGCATCCTGATTTAACACGGTCTATGGATAACCTTGTACTTTCCAACAACATAGATCATCCCCCATCACCAGGACAGTGGTCATCACAGACACGACCTGGAGGAAACCAAAGAGGTGCTTTTGACGTCAGCAAAGGATCTAATTCAGTAAAAGGCGGCATAGAACTTGGATGTGGAAGCAGATCTGCCATTGTGACCAATACTACTGTGGAGATCTTGGTTCCTGAAAGTGTTATCAGCTCTGTGTATGGGGAGAACGGGAGCAACTTGGCTCGTCTAAGACAGATTTCAGGTGCAAAGGTCATGGTACACGAGGGCCGCTCTGGAACAACTGACAGGACTATCGTAATCTCTGGGACACCAGATGAAACACAGGCTGCTCAGAGCCTCCTTCAGGCATTCATACTAACTGGATAG
Protein:  
MHEPNLVAASSVPHSATTVPAAANNNSPLPRRVVFRLLCHASRVGGVIGKSGSIIRQLQQDTSAKIHVDVSTPNSDHHRLIVVVASASLNKKIRLNLLGPTGGDEQQWNDEIEVSAAQEALVRVFERVIDVTAENNGVVLGAESVVSCRLLVKGNQVGALMGKGGKVIDAIRRENGCRIKVLTSDKLPSCASPNDEIVEIEGDILAVKKALVAVSRRLQDCFSVERNRTVENAPLELDSEQTLPPRQVDLPAQRSSMSQPITTSSFSGASGCHPVSLDAEKFSNIDAKIPLQEVAFRILCPNEKVGAIIGKGGAIVRTLQNDSGASIAVGPNVVECNERVIAITALENLELRKSPAQTAAVLVFDRILDAGSGMNLGTRSLITFRLVVPSNQVGCLLGKGGAIISEIRKETGSSIRIFRGDQVPKCVSDNDEVVQIAGEFVNVQDALRNVTGRLRDNLLAAKVSNGAVSRNSSPLASESSFSGQMKEPPFGFHRSSGVSHGINQHPDLTRSMDNLVLSNNIDHPPSPGQWSSQTRPGGNQRGAFDVSKGSNSVKGGIELGCGSRSAIVTNTTVEILVPESVISSVYGENGSNLARLRQISGAKVMVHEGRSGTTDRTIVISGTPDETQAAQSLLQAFILTG